Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928827.1_cds_XP_016476306.1_68149
CDS Infomation

[gene=LOC107797902] [db_xref=GeneID:107797902] [protein=activating signal cointegrator 1-like] [protein_id=XP_016476306.1] [location=complement(join(4068..4424,5263..5361,5462..6160,8026..8175))] [gbkey=CDS]
Sequence

ATGGAATCGTCAGGGCAATGGCTGGAAAGAGCATTACTGGAGCTATGTGACAAGATAGGG
ACTGGTCTTGATTTAGATGCTGAGATAATATCTGGGCTCGTCTCCTATTGCGAGCTTGCT
CCTCCTCTCGATGCTAAAGAATACCTTGATAATATCATAGGTCAGGAAGCTGGAAAAAGT
GTGACGGATGAGTATTTGAGACGGAGAGGTCATTCAGATATATACCACACTACCCAAGGT
ACTTCTGCTTCCAAATTGCAAGCATATGTAAAGCCCCCTTCAGCTGATAGTCTGGCAGCT
GGAACTAAAAAACAAGTGCGAGCACCGAAAGAAAGTAAAGCCTCAAGTAAGCAGGAAAGT
CAGAGCACAGCTGGGACATCAAATGGACGAAACGTACAAAGAGGGAGTCAAGGAAACTCT
ACGACAACAACAACAACTGCACCTCAACCCCAAGCAAGTCAAAGAAACTCTAGAAAGAAA
AAATCTGACAAAGTTGTTTCGCTTGCTGAGGCTGCAAAAGGGTCTATTGTATATCAACAG
GGGAAGCCATGCTCATGCCAAGCCCGTCGACACAGGCTGATTAGCAATTGTTTATCTTGT
GGAAAGATAGTCTGTGAGCAGGAAGGTGAAGGGCCTTGTAACTTTTGTGGTGCACTTGTG
CTAAGGGAAGGAAGCTCGTATGCTGGATTAAATGAAGGCCCAGTTCCAATTTCCGATGCT
GAGGCAGAAGCTGAAGCCTATGCAAAGAGGCTAGTTGACTATGATCGGAACTCTGCAGCA
CGTACGACTGTTATCGATGACCAAAGTGACTACTATGAGTTTGAGGGAAATAGTTGGTTG
TCGAAGGAGGAAAAGGAACTTCTGAGGAAAAAGAAAGAGGAGATAGAAGAGGCTGAACGT
GCTAAACGAAATAGAGTCATAATGACATTTGACCTAGTTGGCCGCAAGGTTCTTATAAAT
AAAGACGAGGCTTCTGAAGAACTGCAGAATGGAATTCTACTCAGACCAGTAGGGGAAAAG
GAAGCAACCCGCATTAGACCTAATCCAAACCTGAAGGTACAACCCGTCTTTGTGGATCCA
GGTCCCAGGAAAACTTCCAAGGCGAAGAATAATAAGAAAGGACCAAGTAATGGCTTGTGC
TTGGAGATTACTGGGAGAGTACAACATGATACCAATGAACTCTCACGTTTGATAGTAGAG
GGCAAGCTACATGGATCTTCGAATAGCAACTCGTGGCATGAGCCATCTGTTAATAGGGCT
ATTGGAACTTCAGATGACTCTGAATGTACTTTAGATTACTATTGA

Peptide Sequence

PEP ID

XP_016476306.1
PEP Infomation

PREDICTED: activating signal cointegrator 1-like [Nicotiana tabacum]
Sequence

MESSGQWLERALLELCDKIGTGLDLDAEIISGLVSYCELAPPLDAKEYLDNIIGQEAGKS
VTDEYLRRRGHSDIYHTTQGTSASKLQAYVKPPSADSLAAGTKKQVRAPKESKASSKQES
QSTAGTSNGRNVQRGSQGNSTTTTTTAPQPQASQRNSRKKKSDKVVSLAEAAKGSIVYQQ
GKPCSCQARRHRLISNCLSCGKIVCEQEGEGPCNFCGALVLREGSSYAGLNEGPVPISDA
EAEAEAYAKRLVDYDRNSAARTTVIDDQSDYYEFEGNSWLSKEEKELLRKKKEEIEEAER
AKRNRVIMTFDLVGRKVLINKDEASEELQNGILLRPVGEKEATRIRPNPNLKVQPVFVDP
GPRKTSKAKNNKKGPSNGLCLEITGRVQHDTNELSRLIVEGKLHGSSNSNSWHEPSVNRA
IGTSDDSECTLDYY

Transcript Sequence

Gene sequence data has not been registered.